Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919690.1_cds_XP_016468878.1_61472
CDS Infomation

[gene=LOC107791348] [db_xref=GeneID:107791348] [protein=uncharacterized WD repeat-containing protein C3H5.08c-like] [protein_id=XP_016468878.1] [location=complement(join(48707..49284,49393..49486,49571..49705,49805..49962,50097..50187,50262..51206))] [gbkey=CDS]
Sequence

ATGCAAGAAATGCAGAGTTTAAATGAAGTAGAAGAAGTTTTCTTTGATTCTGTTGAGTCA
CTGTTGTCAGAAGAACATGCTTTTGTAGAAAAGAAGTCGGGGTATGATTTATGGTTGGAG
GAGCCAGAAAGTGTGAAGACACGACGAGAGAATTTTTTGCACGAAATGGGATTTGTTGAA
TTTGACTGCCTACCTAGTGTAGTCTCTGATGCATCTGATTCAATGGGACTGAATAGGATT
ACAGAAAGCAGTGGTGCAGTCTGTAGTTCTGCTTCAGAGGAAGATTTTATGTGTAATGAA
AGGGAATCCAGTGGTAGTGCAAATTCGTCTGCCGATGAATTAGATCAGACTTGGTTTAAT
GATCTGGCTGAAGTTTCAAGTAGTGGTTGCACTGAGCATTCTCCTGAGGGAGAACATACT
TGTTTCGATGCCACTTCCGATCCCACTCACGGCAAGGATAGTAAGTCGAAAAACCAGAAA
ATGAAGAACAAGTGGTGGAAACAATTTAGCCAAAAGATGAGGAAAAGTCAATCAACTGAT
GTATCTAAGGTATTCACCGAAAAGCAGAAGGTAACTCCAATGGAAGTGCATCTGAACAGG
AAAAGGTTTAAGGAGTTCAGTGCTGTTTACTGTGGACAAGAAATTAGTGCTCACAACGGC
CTAATTTGGACAATGAAGTTTAGTCCAGATGGGAAATATTTGGCAAGTGGTGGGGAAGAT
GGAGTTGTTCGAATTTGGCTGGTCACTGTCGATTCATCATGTGAATCACCTGAGTTCAAT
TTCAGCAGTCACCGCATCAAAGGCAAGCTTGGGCATAAAAAGAATAAGTCTTGTTACACT
CCTGTTATTGTTCCTGAGAAGGTATTCAAGATTGACGAGTCACCGCTGCATGAGTTTCAT
GGCCATACTGCTGGCATATTGGACATCGCTTGGTCCTCGTCTAACTGTCTTCTATCATCA
TCCAAAGATAAAACTGTTCGTCTATGGAAAGTCGGTCTGGATGGATGTCATGGAGTTTTT
CATCACAAAAACTATGTGACATGCATCCAATTCAATCCTGTTAATGAGAACATCTTCATC
AGTGGCTCCATAGATGGAAAAGTTCGTATTTGGGGAGTTCCAGAAAAGCGAGTTGTGGAA
TGGGCCGATGTGCATGACATTGTGACTGCCGTATCATATCAACCAAATGGCAAGGGCTTT
ATAGTTGGTTGTATCTCTGGTACTTGCCGCTTCTATGAAGTAAACGATGAAAGTTTACTT
TCCGTGAACACACAAATATATCTTCATAGTAAGAACAAATCCTCTAGCAGTAGAATTACA
GGCATTCAGTTTTTCGAAAATGACTCTCAAAGAGTTATGATAACATCTGAGGATTCCAAA
ATCCGTATTCTTGATGCGGTCGAGGTTGTGCATAAATATAAAGGTCTATCAAAATCAGGA
AGCCACACATCTGCCACATTTACCTCAACCGGAAAACACGTAGTATCAGTTGGGGAGGAC
TCGCATGTTTATCTTTGGGACTATAATGACGTAAGCATCCAAGCGTCCAAACAAACAAAA
TCTATACGGTCGTGTGAGCATTTCCACTCCAAAGGCGTTTCTGTTGCAATACCATGGTCA
GGACAGGCAACAACAGCAGATGATTCAGAAAATTTTGGCAGTTCTAACGTTGATCCACTA
ATAGGTGAACCTCAAGAGGATTTTTCTCAGACAAGGGATTCAAGCCGATTTTCTTTAGGA
AATTGGTTTACTATGGATGTAACGTCTAGGGGTTCTGTGACATGGCCAGAAGAAATGCTT
CTTCCGTACGATATACCCAGTGCTGAAAATGATGAACATCGTTCTACTTATCACGATGAT
CATCTTTATCGACAGCAACAGCGCAACAAAAACCTTAACTGTAGAGCATTATCTCCAGCA
TGGGGCCTTGTCGTTGTGACAGCTGGTTGGGATGGAAAGATTCGGACATTCCACAACTAT
GGATTGCCCGTACGAGTTTAA

Peptide Sequence

PEP ID

XP_016468878.1
PEP Infomation

PREDICTED: uncharacterized WD repeat-containing protein C3H5.08c-like [Nicotiana tabacum]
Sequence

MQEMQSLNEVEEVFFDSVESLLSEEHAFVEKKSGYDLWLEEPESVKTRRENFLHEMGFVE
FDCLPSVVSDASDSMGLNRITESSGAVCSSASEEDFMCNERESSGSANSSADELDQTWFN
DLAEVSSSGCTEHSPEGEHTCFDATSDPTHGKDSKSKNQKMKNKWWKQFSQKMRKSQSTD
VSKVFTEKQKVTPMEVHLNRKRFKEFSAVYCGQEISAHNGLIWTMKFSPDGKYLASGGED
GVVRIWLVTVDSSCESPEFNFSSHRIKGKLGHKKNKSCYTPVIVPEKVFKIDESPLHEFH
GHTAGILDIAWSSSNCLLSSSKDKTVRLWKVGLDGCHGVFHHKNYVTCIQFNPVNENIFI
SGSIDGKVRIWGVPEKRVVEWADVHDIVTAVSYQPNGKGFIVGCISGTCRFYEVNDESLL
SVNTQIYLHSKNKSSSSRITGIQFFENDSQRVMITSEDSKIRILDAVEVVHKYKGLSKSG
SHTSATFTSTGKHVVSVGEDSHVYLWDYNDVSIQASKQTKSIRSCEHFHSKGVSVAIPWS
GQATTADDSENFGSSNVDPLIGEPQEDFSQTRDSSRFSLGNWFTMDVTSRGSVTWPEEML
LPYDIPSAENDEHRSTYHDDHLYRQQQRNKNLNCRALSPAWGLVVVTAGWDGKIRTFHNY
GLPVRV

Transcript Sequence

Gene sequence data has not been registered.